STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AEM3_LOTGIF-box domain-containing protein. (238 aa)    
Predicted Functional Partners:
V4ARL8_LOTGI
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.830
V4BYN6_LOTGI
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.776
V3ZVU6_LOTGI
RING-type domain-containing protein.
    
 0.649
V4AYZ2_LOTGI
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.600
V4BB47_LOTGI
Ubiquitin-like domain-containing protein.
      
 0.545
V4C2E6_LOTGI
F-box domain-containing protein.
     
 0.544
V4ATZ9_LOTGI
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
      
 0.540
V4ACN7_LOTGI
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 
 0.494
V4B2P1_LOTGI
Ubiquitin-like domain-containing protein.
    
 0.474
V4C8W9_LOTGI
Cyclic nucleotide-binding domain-containing protein.
      
 0.469
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
Server load: low (22%) [HD]