STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AF59_LOTGIProtein-L-isoaspartate O-methyltransferase. (229 aa)    
Predicted Functional Partners:
V4AKJ9_LOTGI
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
 
 
   0.637
V4BFB5_LOTGI
Uncharacterized protein.
      
 0.607
V4B9C1_LOTGI
Uncharacterized protein.
     
 0.586
V4AY36_LOTGI
Uncharacterized protein.
   
  
 0.581
V4ABN5_LOTGI
Uncharacterized protein; Belongs to the BI1 family.
      
 0.571
V4B0F1_LOTGI
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
     
 0.568
V3ZMN2_LOTGI
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
      
 0.540
V4AJV5_LOTGI
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
      
 0.536
V4C4J8_LOTGI
Uncharacterized protein.
      
 0.536
V4BEF9_LOTGI
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.509
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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