STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AG10_LOTGIUncharacterized protein. (372 aa)    
Predicted Functional Partners:
V3ZRI7_LOTGI
Uncharacterized protein.
    
 0.996
V4BG98_LOTGI
MPN domain-containing protein.
    
 0.996
V4AQT9_LOTGI
Uncharacterized protein.
    
 0.939
V4A6J2_LOTGI
Uncharacterized protein.
  
  
  0.935
V4B4J6_LOTGI
RING-type domain-containing protein.
    
 0.825
V4AHS3_LOTGI
Reverse transcriptase domain-containing protein.
    
 0.758
V4B6B6_LOTGI
zf-RVT domain-containing protein.
    
 0.758
V4B7T8_LOTGI
Uncharacterized protein.
    
 0.758
V4BBZ9_LOTGI
Uncharacterized protein.
    
 0.758
V4AQ98_LOTGI
Reverse transcriptase domain-containing protein.
    
 0.689
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.