Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCM7 | V3ZYT3_LOTGI | V3ZXA6 | V3ZYT3 | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] | SH3 domain-containing protein. | 0.672 |
MCM7 | V4AGD9_LOTGI | V3ZXA6 | V4AGD9 | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] | Peptidase_M3 domain-containing protein. | 0.471 |
V3ZYT3_LOTGI | MCM7 | V3ZYT3 | V3ZXA6 | SH3 domain-containing protein. | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] | 0.672 |
V3ZYT3_LOTGI | V4AGD9_LOTGI | V3ZYT3 | V4AGD9 | SH3 domain-containing protein. | Peptidase_M3 domain-containing protein. | 0.473 |
V4A5D4_LOTGI | V4AGD9_LOTGI | V4A5D4 | V4AGD9 | ANK_REP_REGION domain-containing protein. | Peptidase_M3 domain-containing protein. | 0.430 |
V4A5D4_LOTGI | V4B1R6_LOTGI | V4A5D4 | V4B1R6 | ANK_REP_REGION domain-containing protein. | Uncharacterized protein; Belongs to the GroES chaperonin family. | 0.920 |
V4AGD9_LOTGI | MCM7 | V4AGD9 | V3ZXA6 | Peptidase_M3 domain-containing protein. | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] | 0.471 |
V4AGD9_LOTGI | V3ZYT3_LOTGI | V4AGD9 | V3ZYT3 | Peptidase_M3 domain-containing protein. | SH3 domain-containing protein. | 0.473 |
V4AGD9_LOTGI | V4A5D4_LOTGI | V4AGD9 | V4A5D4 | Peptidase_M3 domain-containing protein. | ANK_REP_REGION domain-containing protein. | 0.430 |
V4AGD9_LOTGI | V4AYG5_LOTGI | V4AGD9 | V4AYG5 | Peptidase_M3 domain-containing protein. | Uncharacterized protein. | 0.459 |
V4AGD9_LOTGI | V4B1R6_LOTGI | V4AGD9 | V4B1R6 | Peptidase_M3 domain-containing protein. | Uncharacterized protein; Belongs to the GroES chaperonin family. | 0.402 |
V4AGD9_LOTGI | V4BHH2_LOTGI | V4AGD9 | V4BHH2 | Peptidase_M3 domain-containing protein. | Uncharacterized protein. | 0.409 |
V4AYG5_LOTGI | V4AGD9_LOTGI | V4AYG5 | V4AGD9 | Uncharacterized protein. | Peptidase_M3 domain-containing protein. | 0.459 |
V4B1R6_LOTGI | V4A5D4_LOTGI | V4B1R6 | V4A5D4 | Uncharacterized protein; Belongs to the GroES chaperonin family. | ANK_REP_REGION domain-containing protein. | 0.920 |
V4B1R6_LOTGI | V4AGD9_LOTGI | V4B1R6 | V4AGD9 | Uncharacterized protein; Belongs to the GroES chaperonin family. | Peptidase_M3 domain-containing protein. | 0.402 |
V4BHH2_LOTGI | V4AGD9_LOTGI | V4BHH2 | V4AGD9 | Uncharacterized protein. | Peptidase_M3 domain-containing protein. | 0.409 |