STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AGM2_LOTGICAP-Gly domain-containing protein. (536 aa)    
Predicted Functional Partners:
V4CNM1_LOTGI
TFCD_C domain-containing protein.
    
 0.956
V4AB67_LOTGI
Tubulin-specific chaperone A; Belongs to the TBCA family.
    
 0.827
V4B6D2_LOTGI
Ubiquitin-like domain-containing protein.
    
 0.779
V4A5I4_LOTGI
VOC domain-containing protein.
 
 
    0.711
V3ZG06_LOTGI
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.685
V3ZYS5_LOTGI
C-CAP/cofactor C-like domain-containing protein.
    
 0.643
V4A4V2_LOTGI
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes.
    
 
 0.549
V4A6T8_LOTGI
Macro domain-containing protein.
    
 0.468
V4ABM8_LOTGI
Macro domain-containing protein.
    
 0.468
V3ZSC1_LOTGI
Uncharacterized protein.
      
 0.454
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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