STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AI82_LOTGIRhodanese domain-containing protein. (190 aa)    
Predicted Functional Partners:
V4AVK2_LOTGI
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.601
V4C6S6_LOTGI
Uncharacterized protein.
   
 0.572
V4ADR9_LOTGI
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 0.504
V4ACS6_LOTGI
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 0.496
V4AV77_LOTGI
Uncharacterized protein.
   
 0.489
V4CQF6_LOTGI
Serine/threonine-protein kinase PLK.
   
 0.489
V3YZW3_LOTGI
Uncharacterized protein; Belongs to the cyclin family.
   
 0.480
V4BLL1_LOTGI
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 0.480
V4C8C2_LOTGI
Protein kinase domain-containing protein.
    
 
 0.421
V3ZR16_LOTGI
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.410
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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