STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AIF5_LOTGIRING-type domain-containing protein. (308 aa)    
Predicted Functional Partners:
V4ACA7_LOTGI
Uncharacterized protein.
    
 0.747
V3ZYA6_LOTGI
Non-specific serine/threonine protein kinase.
   
 0.745
V3ZSB6_LOTGI
Uncharacterized protein.
    
 0.718
V4AD67_LOTGI
FHA domain-containing protein.
    
 0.704
V3ZAX8_LOTGI
ANK_REP_REGION domain-containing protein.
   
 0.692
V4B4J6_LOTGI
RING-type domain-containing protein.
   
 0.641
V3ZF78_LOTGI
B30.2/SPRY domain-containing protein.
    
 0.628
V3ZT04_LOTGI
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.620
V4AJ63_LOTGI
Uncharacterized protein.
    
 0.615
V3ZL14_LOTGI
Uncharacterized protein.
   
 
 0.559
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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