STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AJ89_LOTGITPR_REGION domain-containing protein. (379 aa)    
Predicted Functional Partners:
V4AUY5_LOTGI
Triosephosphate isomerase.
  
 0.949
V3ZKJ8_LOTGI
Suf domain-containing protein.
  
 0.931
V4A4J2_LOTGI
Ribos_L4_asso_C domain-containing protein.
  
 
 0.931
V3ZS21_LOTGI
Glyceraldehyde-3-phosphate dehydrogenase.
  
 
 0.917
V4CH49_LOTGI
WD_REPEATS_REGION domain-containing protein.
   
  
 0.861
V4BQ42_LOTGI
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.857
V4A6V0_LOTGI
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
  
 0.804
V3ZRP6_LOTGI
ATP synthase subunit gamma.
  
  
 0.790
V4A9T2_LOTGI
Poly [ADP-ribose] polymerase.
  
 0.782
V4ACD7_LOTGI
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.782
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.