STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AJL6_LOTGIUncharacterized protein. (931 aa)    
Predicted Functional Partners:
V4AVC2_LOTGI
Uncharacterized protein.
   
 0.991
V3ZX92_LOTGI
Uncharacterized protein.
   
 0.951
V3ZVA8_LOTGI
Nuclear pore protein.
   
 0.939
V4AAF7_LOTGI
Uncharacterized protein.
   
 0.933
V4AGY7_LOTGI
SEA domain-containing protein.
   
 0.930
V4AT37_LOTGI
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.929
V4B9V2_LOTGI
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.927
V4A6N0_LOTGI
WD_REPEATS_REGION domain-containing protein.
    
 0.924
V4BAM6_LOTGI
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.924
V4A481_LOTGI
Uncharacterized protein.
   
 0.923
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.