STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AJU5_LOTGIRibonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. (165 aa)    
Predicted Functional Partners:
V3YVG4_LOTGI
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
 0.999
V3ZSW7_LOTGI
Uncharacterized protein.
   
 0.999
V4B4R3_LOTGI
Uncharacterized protein.
    
 0.999
V4BDC3_LOTGI
Uncharacterized protein.
   
 0.996
V4CEP3_LOTGI
Uncharacterized protein.
  
 0.996
V4B3I7_LOTGI
Alba domain-containing protein.
   
 0.970
V3YXD6_LOTGI
Uncharacterized protein.
   
 0.960
V4ABF3_LOTGI
Kri1_C domain-containing protein.
   
 
 0.849
V3YX42_LOTGI
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.772
V4A825_LOTGI
Uncharacterized protein.
   
 0.678
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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