STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AK68_LOTGIUncharacterized protein. (1982 aa)    
Predicted Functional Partners:
V4CH67_LOTGI
DUF5595 domain-containing protein.
    
 
 0.972
V4CS05_LOTGI
Uncharacterized protein.
   
 
 0.960
V4AJQ9_LOTGI
Uncharacterized protein.
    
 
 0.934
V3ZD26_LOTGI
HORMA domain-containing protein.
   
 0.870
V3ZF86_LOTGI
Uncharacterized protein.
    
 
 0.851
V4A964_LOTGI
TACC_C domain-containing protein.
    
 
 0.851
V4AAF4_LOTGI
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
   0.825
V4AAT2_LOTGI
Protein kinase domain-containing protein.
    
   0.825
V3ZV08_LOTGI
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.802
V4CP24_LOTGI
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.788
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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