STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AK82_LOTGIFes1 domain-containing protein. (322 aa)    
Predicted Functional Partners:
V4AEK8_LOTGI
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.997
V4A128_LOTGI
Ribosomal_L23eN domain-containing protein.
  
 0.959
V4CLT1_LOTGI
Ribosomal_L18_c domain-containing protein.
  
 0.956
V4AVJ9_LOTGI
Uncharacterized protein.
  
 0.941
V4A0L9_LOTGI
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
 0.940
V4BAK3_LOTGI
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
  
 0.940
V4CFT5_LOTGI
Uncharacterized protein.
  
 0.940
V4B3B9_LOTGI
Uncharacterized protein.
  
 0.938
V4A7Q3_LOTGI
Uncharacterized protein.
  
 
 0.937
V4AJS1_LOTGI
KH type-2 domain-containing protein.
  
 
 0.937
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.