STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AKX7_LOTGITHUMP domain-containing protein. (172 aa)    
Predicted Functional Partners:
V3ZXI5_LOTGI
Uncharacterized protein.
   
    0.632
V4AUS1_LOTGI
Alkyl transferase; Belongs to the UPP synthase family.
   
    0.632
V4AZ87_LOTGI
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.570
V4B9C1_LOTGI
Uncharacterized protein.
  
  
 0.542
V4CGT3_LOTGI
Uncharacterized protein.
      
 0.540
V3ZMC1_LOTGI
Str_synth domain-containing protein.
  
    0.533
V4AHX5_LOTGI
Str_synth domain-containing protein.
  
    0.533
V4A790_LOTGI
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
  
  
 0.510
V4AE71_LOTGI
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
  
  
 0.510
V4BFD1_LOTGI
tRNA (guanine(26)-N(2))-dimethyltransferase.
    
 
 0.478
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.