STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4ALW6_LOTGIUncharacterized protein. (344 aa)    
Predicted Functional Partners:
V4B413_LOTGI
Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
   
 0.972
V4AI53_LOTGI
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.965
V4AJZ3_LOTGI
t-SNARE coiled-coil homology domain-containing protein.
    
 0.965
V4B697_LOTGI
Uso1_p115_head domain-containing protein.
    
 0.916
V4A9X0_LOTGI
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.905
V4A0B3_LOTGI
t-SNARE coiled-coil homology domain-containing protein.
    
 0.894
V4BMS7_LOTGI
t-SNARE coiled-coil homology domain-containing protein.
    
 0.894
V4B905_LOTGI
Uncharacterized protein.
    
 0.851
V4B0W5_LOTGI
Uncharacterized protein.
    
 
 0.836
V4A823_LOTGI
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.794
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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