STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AM91_LOTGIRING-type domain-containing protein. (407 aa)    
Predicted Functional Partners:
V4BEF4_LOTGI
INCENP_ARK-bind domain-containing protein.
   
 0.573
V4B4B7_LOTGI
Uncharacterized protein.
    
 0.569
V4A8Z0_LOTGI
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.565
V3Z6H2_LOTGI
Protein kinase domain-containing protein.
   
 0.496
V4AQP1_LOTGI
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.480
V4AXL3_LOTGI
Nbl1_Borealin_N domain-containing protein.
   
 0.480
V3Z1I8_LOTGI
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.433
V3ZSB6_LOTGI
Uncharacterized protein.
   
  0.427
V4CH24_LOTGI
PPM-type phosphatase domain-containing protein.
    
 0.426
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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