STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AMT9_LOTGIWD_REPEATS_REGION domain-containing protein. (315 aa)    
Predicted Functional Partners:
V4A8C1_LOTGI
TPR_REGION domain-containing protein.
    
 0.998
V3ZZE7_LOTGI
Pex14_N domain-containing protein.
    
 0.976
V3ZM68_LOTGI
SH3 domain-containing protein.
   
 0.969
V3ZNN5_LOTGI
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.960
V4AN61_LOTGI
Thiolase_N domain-containing protein.
    
 0.960
V4B9Q0_LOTGI
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.926
V4BEM3_LOTGI
RING-type domain-containing protein.
     
 0.926
V4C940_LOTGI
DUF4097 domain-containing protein.
    
 0.926
V4BAI0_LOTGI
Alkylglycerone-phosphate synthase; Catalyzes the exchange of an acyl for a long-chain alkyl group and the formation of the ether bond in the biosynthesis of ether phospholipids; Belongs to the FAD-binding oxidoreductase/transferase type 4 family.
     
 0.912
V4AZG4_LOTGI
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.856
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.