STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AP71_LOTGIUDENN domain-containing protein. (416 aa)    
Predicted Functional Partners:
V3Z105_LOTGI
Uncharacterized protein.
    
 0.747
V4AUD5_LOTGI
Uncharacterized protein.
    
 0.747
V3ZVT1_LOTGI
Cytochrome b5 heme-binding domain-containing protein.
      
 0.682
V3ZWK7_LOTGI
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
     
 0.543
V4BKW3_LOTGI
Uncharacterized protein.
    
 
 0.429
V3ZL41_LOTGI
Uncharacterized protein.
   
 
  0.400
V4A593_LOTGI
Uncharacterized protein.
   
 
  0.400
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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