STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4APB2_LOTGIUncharacterized protein. (688 aa)    
Predicted Functional Partners:
V3ZQB0_LOTGI
CPSF_A domain-containing protein.
   
 0.999
V4BJZ7_LOTGI
WD_REPEATS_REGION domain-containing protein.
   
 0.999
V4AFS8_LOTGI
Fip1 domain-containing protein.
    
 0.998
V4B1B4_LOTGI
Uncharacterized protein.
   
 0.998
V3Z9V2_LOTGI
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.995
V3ZTQ1_LOTGI
Uncharacterized protein.
   
 0.995
V4BFL7_LOTGI
Cleavage and polyadenylation specificity factor subunit 2.
   
0.995
V4A5S6_LOTGI
WD_REPEATS_REGION domain-containing protein.
   
 0.994
V4BAE4_LOTGI
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.993
V3ZKJ8_LOTGI
Suf domain-containing protein.
   
 0.977
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.