STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4APG6_LOTGIProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (415 aa)    
Predicted Functional Partners:
V3YWI9_LOTGI
WD_REPEATS_REGION domain-containing protein.
   
 
 0.712
V3ZYA6_LOTGI
Non-specific serine/threonine protein kinase.
    
 0.592
V4AV77_LOTGI
Uncharacterized protein.
    
 
0.511
V4CQF6_LOTGI
Serine/threonine-protein kinase PLK.
    
 
0.511
V4B166_LOTGI
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.504
V4B1R5_LOTGI
Peptidyl-prolyl cis-trans isomerase.
    
 0.460
V3ZUT2_LOTGI
Small ubiquitin-related modifier.
    
 0.452
V4A2E1_LOTGI
Uncharacterized protein.
     
 0.446
V3ZLI8_LOTGI
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 
0.441
V4A0L4_LOTGI
Uncharacterized protein.
    
 0.438
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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