STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AR20_LOTGIElongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (413 aa)    
Predicted Functional Partners:
V4B6P7_LOTGI
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
  
 0.987
V4AJS1_LOTGI
KH type-2 domain-containing protein.
  
 
 0.969
V4BAK3_LOTGI
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.969
V4BC85_LOTGI
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 0.965
V4CLT1_LOTGI
Ribosomal_L18_c domain-containing protein.
  
 
 0.964
V3ZQS9_LOTGI
Uncharacterized protein.
  
 0.962
V4A128_LOTGI
Ribosomal_L23eN domain-containing protein.
  
 
 0.962
V4AG37_LOTGI
Uncharacterized protein.
   
 0.962
V4ADN2_LOTGI
Uncharacterized protein.
  
 0.961
V4B3B9_LOTGI
Uncharacterized protein.
  
 0.959
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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