STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AST5_LOTGIRad51 domain-containing protein. (174 aa)    
Predicted Functional Partners:
V3ZZV8_LOTGI
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.959
V4A380_LOTGI
3'-5' exonuclease domain-containing protein.
  
 0.959
V3ZYD5_LOTGI
Uncharacterized protein.
   
 0.943
V4BFG0_LOTGI
ERCC4 domain-containing protein.
   
 0.943
V4C3A9_LOTGI
RECA_2 domain-containing protein.
   
 0.940
V3ZNP8_LOTGI
BRCA-2_helical domain-containing protein.
   
 0.933
V4B8U7_LOTGI
Uncharacterized protein.
    
 0.844
V4B097_LOTGI
UvrD-like helicase C-terminal domain-containing protein.
  
 
 0.834
V3Z9S6_LOTGI
Uncharacterized protein.
  
 0.819
V4B982_LOTGI
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.812
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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