STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4ASX8_LOTGITcp10_C domain-containing protein. (395 aa)    
Predicted Functional Partners:
V4BKW3_LOTGI
Uncharacterized protein.
   
 0.959
V4C658_LOTGI
Uncharacterized protein.
   
 0.943
V4BB29_LOTGI
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
    
 
 0.772
V4AV77_LOTGI
Uncharacterized protein.
   
 0.767
V4CQF6_LOTGI
Serine/threonine-protein kinase PLK.
   
 0.767
V4BV55_LOTGI
Uncharacterized protein.
   
  
 0.713
V3ZE95_LOTGI
Uncharacterized protein.
   
 
  0.656
V4AS38_LOTGI
Uncharacterized protein.
   
 
 0.646
V4B1A1_LOTGI
Uncharacterized protein.
   
 
 0.646
V3Z9D0_LOTGI
HAUS6_N domain-containing protein.
   
 
 0.583
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.