STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4ATI0_LOTGIUncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1009 aa)    
Predicted Functional Partners:
V4CAI7_LOTGI
Uncharacterized protein.
 
  
  0.902
V3ZLZ6_LOTGI
Myosin-VI_CBD domain-containing protein.
 
  
   0.699
V3ZMF4_LOTGI
Myosin_tail_1 domain-containing protein.
 
  
  0.513
V4AFA3_LOTGI
Uncharacterized protein.
    
 0.499
V4A503_LOTGI
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
    
 0.434
V4AQ12_LOTGI
Uncharacterized protein.
    
 0.422
V3YVK2_LOTGI
Myosin_tail_1 domain-containing protein.
 
  
  0.413
V3ZAP6_LOTGI
Uncharacterized protein; Belongs to the actin family.
    
  0.412
V3Z137_LOTGI
Uncharacterized protein; Belongs to the actin family.
    
  0.405
V3ZNH0_LOTGI
Uncharacterized protein.
    
  0.405
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.