STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AV12_LOTGIFA_FANCE domain-containing protein. (549 aa)    
Predicted Functional Partners:
V4AEK8_LOTGI
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
V3ZYD5_LOTGI
Uncharacterized protein.
    
 0.997
V4BFG0_LOTGI
ERCC4 domain-containing protein.
    
 0.989
V4AB18_LOTGI
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
  
 0.982
V4CLT1_LOTGI
Ribosomal_L18_c domain-containing protein.
  
 0.981
V4A4J2_LOTGI
Ribos_L4_asso_C domain-containing protein.
  
 0.979
V4CM71_LOTGI
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.979
V4APD8_LOTGI
Ribosomal_L7Ae domain-containing protein.
  
 0.977
V3ZQ81_LOTGI
Uncharacterized protein.
   
 0.976
V4A128_LOTGI
Ribosomal_L23eN domain-containing protein.
  
 0.975
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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