STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AVE0_LOTGIIsocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (410 aa)    
Predicted Functional Partners:
V4CSK4_LOTGI
Uncharacterized protein; Belongs to the aconitase/IPM isomerase family.
  
 0.993
V4B7V8_LOTGI
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.992
V3ZWW0_LOTGI
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.978
V4A232_LOTGI
Transket_pyr domain-containing protein.
   
 
 0.972
V4AWY5_LOTGI
Transket_pyr domain-containing protein.
   
 
 0.972
V4A3U4_LOTGI
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.970
V4AZ28_LOTGI
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.959
V4CBB0_LOTGI
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.959
V3ZIF7_LOTGI
Citrate synthase; Belongs to the citrate synthase family.
  
 0.956
V4ABY1_LOTGI
Aspartate aminotransferase.
   
 0.917
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.