STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AWR7_LOTGIO-acyltransferase. (444 aa)    
Predicted Functional Partners:
V4AML0_LOTGI
Uncharacterized protein.
    
 0.917
V4BLP6_LOTGI
FAD-binding PCMH-type domain-containing protein.
     
 0.911
V4AYX7_LOTGI
Uncharacterized protein.
    
 0.875
V3ZZS9_LOTGI
Uncharacterized protein.
    
 
 0.690
V4AFT1_LOTGI
Tyrosine--tRNA ligase.
   
  
 0.684
V4AH75_LOTGI
LNS2 domain-containing protein.
    
 0.573
V4AU71_LOTGI
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
     
 0.544
V3ZBT9_LOTGI
Uncharacterized protein.
      
 0.540
V3ZYM2_LOTGI
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
      
 0.522
V4AKS1_LOTGI
PID domain-containing protein.
      
 0.520
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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