STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AXJ3_LOTGIUncharacterized protein. (508 aa)    
Predicted Functional Partners:
V4BDF8_LOTGI
Uncharacterized protein.
     
 0.616
V3ZES9_LOTGI
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.596
V4A284_LOTGI
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.596
V4A4G0_LOTGI
Uncharacterized protein.
   
  
 0.551
V4BAJ3_LOTGI
Uncharacterized protein.
      
 0.547
V4A2J4_LOTGI
GRASP55_65 domain-containing protein.
   
  
 0.542
V3ZHQ4_LOTGI
Uncharacterized protein.
      
 0.541
V4A4W9_LOTGI
Protein kish; Involved in the early part of the secretory pathway.
      
 0.541
V3ZWK7_LOTGI
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
      
 0.540
V4C8E1_LOTGI
FHA domain-containing protein.
      
 0.540
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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