STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AXK1_LOTGIUncharacterized protein. (565 aa)    
Predicted Functional Partners:
V4B0N8_LOTGI
Uncharacterized protein.
 
  
 
0.924
V4AXJ6_LOTGI
Uncharacterized protein.
 
  
 0.914
V4AXK7_LOTGI
Uncharacterized protein.
 
 
   0.910
V4A753_LOTGI
Uncharacterized protein.
 
  
 0.907
V4B9W7_LOTGI
Protein kinase domain-containing protein.
 
  
   0.899
V4B0P8_LOTGI
Uncharacterized protein.
 
 
   0.856
V4AXJ2_LOTGI
Uncharacterized protein.
 
 
  
0.854
V3ZKE2_LOTGI
Uncharacterized protein.
 
  
  0.838
V4BHZ2_LOTGI
Uncharacterized protein.
    
 0.815
V4BU36_LOTGI
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
 
  
   0.792
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.