STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AXS8_LOTGISaposin B-type domain-containing protein. (528 aa)    
Predicted Functional Partners:
V4AK90_LOTGI
Endo/exonuclease/phosphatase domain-containing protein.
     
 0.944
V4AZF3_LOTGI
Uncharacterized protein; Belongs to the acid ceramidase family.
   
 0.941
V4ADZ3_LOTGI
Glucosylceramidase.
   
 
 0.921
V4B2P4_LOTGI
Glucosylceramidase.
   
 
 0.921
V3ZKC6_LOTGI
Neutral ceramidase.
     
 0.917
V3ZPI4_LOTGI
DAGKc domain-containing protein.
    
 0.917
V3ZK49_LOTGI
Uncharacterized protein.
     
 0.916
V3ZUF8_LOTGI
TLC domain-containing protein.
     
 0.914
V3ZY22_LOTGI
Uncharacterized protein.
     
 0.914
V4A0X4_LOTGI
Uncharacterized protein.
     
 0.914
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.