STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AY25_LOTGIUncharacterized protein. (893 aa)    
Predicted Functional Partners:
V4A6M5_LOTGI
Uncharacterized protein.
   
 
 0.993
V4AQZ6_LOTGI
Uncharacterized protein.
   
 
 0.993
V4B1C8_LOTGI
Uncharacterized protein.
   
 
 0.993
V3ZE76_LOTGI
PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.
    
 
 0.992
V4A6G5_LOTGI
SUZ domain-containing protein.
    
 
 0.992
V4BJX6_LOTGI
EGF-like domain-containing protein.
    
 
 0.992
V3Z9T0_LOTGI
FERM domain-containing protein.
    
   0.991
V3ZMI7_LOTGI
WD_REPEATS_REGION domain-containing protein.
   
   0.991
V3ZRF4_LOTGI
Uncharacterized protein.
   
 
 0.991
V3ZRG8_LOTGI
Death domain-containing protein.
   
 
 0.991
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.