STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AYG7_LOTGIAMPK1_CBM domain-containing protein. (400 aa)    
Predicted Functional Partners:
V4BAB7_LOTGI
Peptidase C50 domain-containing protein.
   
 
 0.774
V4BV55_LOTGI
Uncharacterized protein.
   
  
 0.748
V4CH67_LOTGI
DUF5595 domain-containing protein.
   
  
 0.741
V3ZPN6_LOTGI
Rho-GAP domain-containing protein.
   
  
 0.730
V3ZTN1_LOTGI
Protein kinase domain-containing protein.
   
  
 0.724
V4B686_LOTGI
Uncharacterized protein.
   
  
 0.722
V4AII0_LOTGI
Protein kinase domain-containing protein.
   
 
 0.577
V4CNB3_LOTGI
BUB1 N-terminal domain-containing protein.
   
 
 0.577
V3ZD26_LOTGI
HORMA domain-containing protein.
   
 
 0.568
V4AWQ6_LOTGI
Uncharacterized protein.
   
  
 0.564
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.