STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AYI9_LOTGIUncharacterized protein. (90 aa)    
Predicted Functional Partners:
V4ATJ4_LOTGI
Uncharacterized protein.
    
 
 0.629
V4BHC8_LOTGI
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.610
V3ZZU7_LOTGI
Uncharacterized protein.
    
 
 0.443
V3ZEZ4_LOTGI
Uncharacterized protein.
    
 
 0.423
V4AEX3_LOTGI
Uncharacterized protein.
    
 
 0.423
V4AKM6_LOTGI
Thioredoxin domain-containing protein.
    
 
 0.423
V4AY83_LOTGI
Uncharacterized protein.
    
 
 0.423
V4B4B7_LOTGI
Uncharacterized protein.
     
 0.423
V4B6G1_LOTGI
Cystatin domain-containing protein; Belongs to the cystatin family.
    
 
 0.423
V4BZU9_LOTGI
Uncharacterized protein.
    
 
 0.419
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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