Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
V3Z1P0_LOTGI | V3ZPP9_LOTGI | V3Z1P0 | V3ZPP9 | RPOLD domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.858 |
V3Z1P0_LOTGI | V3ZW05_LOTGI | V3Z1P0 | V3ZW05 | RPOLD domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.948 |
V3Z1P0_LOTGI | V4A0Z9_LOTGI | V3Z1P0 | V4A0Z9 | RPOLD domain-containing protein. | Uncharacterized protein. | 0.999 |
V3Z1P0_LOTGI | V4A7K6_LOTGI | V3Z1P0 | V4A7K6 | RPOLD domain-containing protein. | RPOL4c domain-containing protein. | 0.976 |
V3Z1P0_LOTGI | V4ALU5_LOTGI | V3Z1P0 | V4ALU5 | RPOLD domain-containing protein. | Uncharacterized protein. | 0.999 |
V3Z1P0_LOTGI | V4AUI1_LOTGI | V3Z1P0 | V4AUI1 | RPOLD domain-containing protein. | GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import. | 0.778 |
V3Z1P0_LOTGI | V4B063_LOTGI | V3Z1P0 | V4B063 | RPOLD domain-containing protein. | Iwr1 domain-containing protein. | 0.612 |
V3Z1P0_LOTGI | V4B3V0_LOTGI | V3Z1P0 | V4B3V0 | RPOLD domain-containing protein. | RPOLD domain-containing protein. | 0.650 |
V3Z1P0_LOTGI | V4C8A9_LOTGI | V3Z1P0 | V4C8A9 | RPOLD domain-containing protein. | RNA_pol_L_2 domain-containing protein. | 0.977 |
V3ZPP9_LOTGI | V3Z1P0_LOTGI | V3ZPP9 | V3Z1P0 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | RPOLD domain-containing protein. | 0.858 |
V3ZPP9_LOTGI | V3ZW05_LOTGI | V3ZPP9 | V3ZW05 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
V3ZPP9_LOTGI | V4A0Z9_LOTGI | V3ZPP9 | V4A0Z9 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Uncharacterized protein. | 0.998 |
V3ZPP9_LOTGI | V4A7K6_LOTGI | V3ZPP9 | V4A7K6 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | RPOL4c domain-containing protein. | 0.998 |
V3ZPP9_LOTGI | V4ALU5_LOTGI | V3ZPP9 | V4ALU5 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Uncharacterized protein. | 0.998 |
V3ZPP9_LOTGI | V4B063_LOTGI | V3ZPP9 | V4B063 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Iwr1 domain-containing protein. | 0.714 |
V3ZPP9_LOTGI | V4B3V0_LOTGI | V3ZPP9 | V4B3V0 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | RPOLD domain-containing protein. | 0.998 |
V3ZPP9_LOTGI | V4C8A9_LOTGI | V3ZPP9 | V4C8A9 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | RNA_pol_L_2 domain-containing protein. | 0.999 |
V3ZW05_LOTGI | V3Z1P0_LOTGI | V3ZW05 | V3Z1P0 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RPOLD domain-containing protein. | 0.948 |
V3ZW05_LOTGI | V3ZPP9_LOTGI | V3ZW05 | V3ZPP9 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.998 |
V3ZW05_LOTGI | V4A0Z9_LOTGI | V3ZW05 | V4A0Z9 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.998 |
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