STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4B177_LOTGIUncharacterized protein. (364 aa)    
Predicted Functional Partners:
V4BMI4_LOTGI
Aha1_N domain-containing protein.
   
 
 0.947
V3ZZ19_LOTGI
CS domain-containing protein.
   
 0.940
V4AJ14_LOTGI
HATPase_c domain-containing protein.
  
 0.915
V4AAZ0_LOTGI
TPR_REGION domain-containing protein.
  
 
 0.867
V4A4K5_LOTGI
RanBD1 domain-containing protein.
 
 
 
 0.857
V4AIM1_LOTGI
Flavin_Reduct domain-containing protein.
  
 0.782
V4B3N8_LOTGI
Uncharacterized protein.
  
 0.782
V4CMR5_LOTGI
Uncharacterized protein.
  
 0.782
V4AS52_LOTGI
Uncharacterized protein.
   
 0.741
V4CIC0_LOTGI
MI domain-containing protein.
   
 0.741
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.