STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4B1K3_LOTGIP4Ha_N domain-containing protein. (536 aa)    
Predicted Functional Partners:
V4A0T0_LOTGI
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
     
 0.903
V4A9N9_LOTGI
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
     
 0.903
V3ZGC9_LOTGI
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.
     
  0.900
V4AML6_LOTGI
CYTOSOL_AP domain-containing protein.
     
  0.900
V4BB07_LOTGI
Proline iminopeptidase; Belongs to the peptidase S33 family.
     
  0.900
V4ASN2_LOTGI
Guanylate kinase-like domain-containing protein.
   
   0.500
V4C582_LOTGI
Guanylate kinase-like domain-containing protein.
   
   0.500
V3ZNZ0_LOTGI
Protein disulfide-isomerase.
    
 0.407
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.