STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4B2K4_LOTGIUncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (152 aa)    
Predicted Functional Partners:
V4AEK8_LOTGI
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
V3Z385_LOTGI
Uncharacterized protein.
   
 0.995
V3ZSN5_LOTGI
Uncharacterized protein.
   
 0.995
V4A4W6_LOTGI
Ribosomal_S10 domain-containing protein.
  
 0.995
V4AJS1_LOTGI
KH type-2 domain-containing protein.
  
 0.995
V4B3X6_LOTGI
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
  
 0.995
V4BU40_LOTGI
Uncharacterized protein.
   
 0.995
V3Z9L2_LOTGI
Uncharacterized protein.
  
 0.994
V3ZR06_LOTGI
S1-like domain-containing protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
  
 0.994
V3ZSD5_LOTGI
Uncharacterized protein.
  
 0.994
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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