STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4B2U3_LOTGIUncharacterized protein. (713 aa)    
Predicted Functional Partners:
V4AJL1_LOTGI
Bardet-Biedl syndrome 2 protein homolog.
  
 0.994
V3ZY76_LOTGI
BBS1 domain-containing protein.
   
 0.993
V4BYG1_LOTGI
TPR_REGION domain-containing protein.
  
 0.992
V4BHA5_LOTGI
TPR_REGION domain-containing protein.
    
 0.987
V4AUG7_LOTGI
PHTB1_N domain-containing protein.
    
 0.957
V4B7H3_LOTGI
Uncharacterized protein.
    
 0.957
V3ZMW5_LOTGI
Uncharacterized protein.
   
 0.939
V4C624_LOTGI
BTB domain-containing protein.
   
 0.909
V3ZR86_LOTGI
Uncharacterized protein.
    
 0.904
V4A726_LOTGI
Uncharacterized protein.
    
 0.803
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.