Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
V3YWL8_LOTGI | V3ZWK7_LOTGI | V3YWL8 | V3ZWK7 | VPS9 domain-containing protein. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.474 |
V3YWL8_LOTGI | V4B405_LOTGI | V3YWL8 | V4B405 | VPS9 domain-containing protein. | Uncharacterized protein. | 0.568 |
V3YWL8_LOTGI | V4C831_LOTGI | V3YWL8 | V4C831 | VPS9 domain-containing protein. | FYVE-type domain-containing protein. | 0.828 |
V3Z5B5_LOTGI | V3ZNM9_LOTGI | V3Z5B5 | V3ZNM9 | Ras-GAP domain-containing protein. | VPS9 domain-containing protein. | 0.925 |
V3Z5B5_LOTGI | V3ZWK7_LOTGI | V3Z5B5 | V3ZWK7 | Ras-GAP domain-containing protein. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.474 |
V3Z5B5_LOTGI | V4B405_LOTGI | V3Z5B5 | V4B405 | Ras-GAP domain-containing protein. | Uncharacterized protein. | 0.568 |
V3Z5B5_LOTGI | V4C831_LOTGI | V3Z5B5 | V4C831 | Ras-GAP domain-containing protein. | FYVE-type domain-containing protein. | 0.841 |
V3Z5B5_LOTGI | V4CG08_LOTGI | V3Z5B5 | V4CG08 | Ras-GAP domain-containing protein. | Uncharacterized protein. | 0.471 |
V3ZNM9_LOTGI | V3Z5B5_LOTGI | V3ZNM9 | V3Z5B5 | VPS9 domain-containing protein. | Ras-GAP domain-containing protein. | 0.925 |
V3ZNM9_LOTGI | V3ZWK7_LOTGI | V3ZNM9 | V3ZWK7 | VPS9 domain-containing protein. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.474 |
V3ZNM9_LOTGI | V4B405_LOTGI | V3ZNM9 | V4B405 | VPS9 domain-containing protein. | Uncharacterized protein. | 0.568 |
V3ZNM9_LOTGI | V4C831_LOTGI | V3ZNM9 | V4C831 | VPS9 domain-containing protein. | FYVE-type domain-containing protein. | 0.841 |
V3ZNM9_LOTGI | V4CG08_LOTGI | V3ZNM9 | V4CG08 | VPS9 domain-containing protein. | Uncharacterized protein. | 0.471 |
V3ZWK7_LOTGI | V3YWL8_LOTGI | V3ZWK7 | V3YWL8 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | VPS9 domain-containing protein. | 0.474 |
V3ZWK7_LOTGI | V3Z5B5_LOTGI | V3ZWK7 | V3Z5B5 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Ras-GAP domain-containing protein. | 0.474 |
V3ZWK7_LOTGI | V3ZNM9_LOTGI | V3ZWK7 | V3ZNM9 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | VPS9 domain-containing protein. | 0.474 |
V3ZWK7_LOTGI | V4B405_LOTGI | V3ZWK7 | V4B405 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Uncharacterized protein. | 0.720 |
V3ZWK7_LOTGI | V4CG08_LOTGI | V3ZWK7 | V4CG08 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Uncharacterized protein. | 0.943 |
V4A1G3_LOTGI | V4A8L9_LOTGI | V4A1G3 | V4A8L9 | Uncharacterized protein. | Uncharacterized protein. | 0.682 |
V4A1G3_LOTGI | V4B405_LOTGI | V4A1G3 | V4B405 | Uncharacterized protein. | Uncharacterized protein. | 0.625 |
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