STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4B4P8_LOTGIUroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. (366 aa)    
Predicted Functional Partners:
V4B2B7_LOTGI
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
 
 0.995
V4A1R5_LOTGI
Uncharacterized protein.
  
 0.993
V4C5Y1_LOTGI
HEM4 domain-containing protein.
  
 
 0.992
V3ZYN3_LOTGI
Uncharacterized protein.
 0.978
V4ALQ0_LOTGI
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
 
  
 0.951
V4ANS5_LOTGI
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
 
 
 0.808
V4CQI9_LOTGI
Flavodoxin-like domain-containing protein.
    
  0.781
V4ADN0_LOTGI
5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
     
 0.673
V4B9C1_LOTGI
Uncharacterized protein.
  
  
 0.644
V4B0F1_LOTGI
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
  
  
 0.610
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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