STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4B585_LOTGILisH domain-containing protein. (722 aa)    
Predicted Functional Partners:
V3ZIA1_LOTGI
Uncharacterized protein.
    
 
 0.812
V4A1J4_LOTGI
Uncharacterized protein.
    
 
 0.780
V3ZZR5_LOTGI
Uncharacterized protein.
    
 
 0.742
V3ZU70_LOTGI
Uncharacterized protein.
   
 
 0.735
V4A3P3_LOTGI
Uncharacterized protein.
   
 
 0.698
V4BDY2_LOTGI
J domain-containing protein.
      
 0.682
V4CPI5_LOTGI
SEC63 domain-containing protein.
      
 0.682
V4AE65_LOTGI
Uncharacterized protein.
    
 
 0.655
V4CP36_LOTGI
Uncharacterized protein.
   
    0.580
V3ZTE2_LOTGI
Uncharacterized protein.
    
 
 0.558
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.