STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4B5A2_LOTGIF5/8 type C domain-containing protein. (137 aa)    
Predicted Functional Partners:
V4B247_LOTGI
ANAPC5 domain-containing protein.
   
 0.969
V3ZMW2_LOTGI
TPR_REGION domain-containing protein.
    
 0.965
V4AEN9_LOTGI
APC1_C domain-containing protein.
    
 0.965
V4CRB5_LOTGI
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.965
V3Z105_LOTGI
Uncharacterized protein.
    
 0.964
V4AJU0_LOTGI
Uncharacterized protein.
   
 0.958
V4C885_LOTGI
Uncharacterized protein.
    
 0.958
V4BCN1_LOTGI
Uncharacterized protein.
    
 0.942
V4BXC9_LOTGI
Uncharacterized protein.
    
 0.942
V3ZVG1_LOTGI
Uncharacterized protein.
    
 0.939
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.