STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4B5N3_LOTGIProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (375 aa)    
Predicted Functional Partners:
V4B9Y0_LOTGI
ANK_REP_REGION domain-containing protein.
   
 0.933
V4BV21_LOTGI
WD_REPEATS_REGION domain-containing protein.
 
      0.832
V4AZL7_LOTGI
Uncharacterized protein.
    
 0.786
V3ZKK8_LOTGI
Uncharacterized protein.
    
 0.727
V3ZPZ2_LOTGI
Uncharacterized protein.
    
 0.727
V4B1L4_LOTGI
Uncharacterized protein.
    
 0.696
V4CEV0_LOTGI
RIO domain-containing protein.
    
 0.692
V4A3A3_LOTGI
Bms1-type G domain-containing protein.
    
 0.651
V4B3G2_LOTGI
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
    
 0.602
V4AEK8_LOTGI
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.593
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.