STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4B8T7_LOTGIPhosphodiesterase. (461 aa)    
Predicted Functional Partners:
V4AZK9_LOTGI
AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.
     
 0.951
V3YXH7_LOTGI
Pribosyltran domain-containing protein.
     
 0.920
V4A3B1_LOTGI
Uncharacterized protein; Belongs to the GDA1/CD39 NTPase family.
     
 0.915
V4AXK0_LOTGI
Uncharacterized protein; Belongs to the GDA1/CD39 NTPase family.
     
 0.915
V4BMW7_LOTGI
Uncharacterized protein; Belongs to the GDA1/CD39 NTPase family.
     
 0.912
V3ZS32_LOTGI
PfkB domain-containing protein.
     
 0.910
V3ZZ33_LOTGI
PfkB domain-containing protein.
     
 0.910
V3YXI2_LOTGI
GMP reductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides.
     
 0.908
V4B1L5_LOTGI
GTP:AMP phosphotransferase, mitochondrial; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Has GTP:AMP phosphotransferase and ITP:AMP phosphotransferase activities.
     
 0.903
V4B9F8_LOTGI
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.903
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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