STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4BAB7_LOTGIPeptidase C50 domain-containing protein. (2192 aa)    
Predicted Functional Partners:
V4AXL3_LOTGI
Nbl1_Borealin_N domain-containing protein.
   
 
 0.962
V4AV77_LOTGI
Uncharacterized protein.
   
 0.961
V4CQF6_LOTGI
Serine/threonine-protein kinase PLK.
   
 0.961
V4ACN7_LOTGI
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 
 0.959
V3ZX92_LOTGI
Uncharacterized protein.
   
 
 0.946
V4AGY7_LOTGI
SEA domain-containing protein.
   
 
 0.946
V4CH67_LOTGI
DUF5595 domain-containing protein.
   
 
 0.937
V3ZQP8_LOTGI
Uncharacterized protein.
   
 0.932
V4BVN0_LOTGI
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.932
V3ZTN1_LOTGI
Protein kinase domain-containing protein.
   
 
 0.913
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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