STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4BCJ4_LOTGIUncharacterized protein. (197 aa)    
Predicted Functional Partners:
V3ZWK7_LOTGI
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.738
V4ATG0_LOTGI
Uncharacterized protein.
    
 0.658
V4A6W8_LOTGI
Uncharacterized protein.
  
 
0.623
V4A620_LOTGI
Sec2p domain-containing protein.
    
 0.621
V4BBL7_LOTGI
Uncharacterized protein.
    
 0.621
V4ACE9_LOTGI
Sec8_exocyst domain-containing protein.
    
 0.618
V4A6M0_LOTGI
Sec3-PIP2_bind domain-containing protein.
    
 0.592
V3YXG4_LOTGI
Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.582
V3ZU16_LOTGI
Uncharacterized protein.
    
 0.579
V3ZRV1_LOTGI
Uncharacterized protein.
 
 
 0.573
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.