STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4BE71_LOTGIUncharacterized protein. (320 aa)    
Predicted Functional Partners:
V4AIV7_LOTGI
PKD_channel domain-containing protein.
 
  
 
 0.945
V3Z0D8_LOTGI
Uncharacterized protein.
 
 
 
 0.864
V4AUL2_LOTGI
Uncharacterized protein.
 
 
 
 0.550
V4BPR9_LOTGI
Uncharacterized protein.
  
 
 
0.529
V4B0W8_LOTGI
PLAT domain-containing protein.
  
 
 
0.528
V4B0H2_LOTGI
PLAT domain-containing protein.
  
 
 
0.518
V4CNS8_LOTGI
Uncharacterized protein.
  
 
 
0.505
V4AYC3_LOTGI
PKD_channel domain-containing protein.
 
  
 
 0.502
V4BWY1_LOTGI
Uncharacterized protein.
      
 0.471
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.