STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4BF11_LOTGIUncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family. (199 aa)    
Predicted Functional Partners:
V4CP36_LOTGI
Uncharacterized protein.
   
 0.961
V4AQE1_LOTGI
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
   
 0.956
V4BZJ8_LOTGI
UBA_e1_C domain-containing protein.
   
 0.956
V3ZD39_LOTGI
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
0.936
V4AAF6_LOTGI
Ubiquitin-like domain-containing protein.
   
 0.931
V4C357_LOTGI
Ubiquitin-like domain-containing protein.
   
 0.931
V3Z1I8_LOTGI
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
0.854
V4B166_LOTGI
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
0.852
V4C2X0_LOTGI
E2_bind domain-containing protein.
   
 0.829
V3ZCI2_LOTGI
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 
0.819
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.