STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4BFD7_LOTGIUncharacterized protein. (480 aa)    
Predicted Functional Partners:
V4B6C3_LOTGI
Uncharacterized protein.
   
  
 0.569
V4CCR8_LOTGI
Uncharacterized protein.
   
  
 0.561
V4BHV2_LOTGI
Uncharacterized protein.
      
 0.546
V4BX81_LOTGI
Methyltranfer_dom domain-containing protein.
      
 0.540
V3ZV42_LOTGI
Uncharacterized protein.
      
 0.528
V3ZPN6_LOTGI
Rho-GAP domain-containing protein.
      
 0.472
V3ZVW5_LOTGI
Uncharacterized protein.
      
 0.470
V4AV25_LOTGI
Nucleoside diphosphate kinase.
   
  
 0.408
V4AZ87_LOTGI
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.405
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.