STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4BFI3_LOTGIPDZ domain-containing protein. (91 aa)    
Predicted Functional Partners:
V3ZNF0_LOTGI
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.878
V4BV73_LOTGI
Uncharacterized protein.
    
 0.878
V4BHZ2_LOTGI
Uncharacterized protein.
    
 0.764
V4BTZ8_LOTGI
RabBD domain-containing protein.
    
 0.707
V4B6G6_LOTGI
Uncharacterized protein.
   
 0.655
V4B0F1_LOTGI
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
  
 
 0.614
V3YXH7_LOTGI
Pribosyltran domain-containing protein.
  
 
 0.585
V4BKW3_LOTGI
Uncharacterized protein.
   
 0.576
V4BXC1_LOTGI
Vang-like protein.
    
 0.551
V4C8W4_LOTGI
Uncharacterized protein.
    
 0.490
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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