STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4BH79_LOTGIUMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily. (192 aa)    
Predicted Functional Partners:
V4B2C9_LOTGI
Thymidylate_kin domain-containing protein.
    
 0.965
V4A1Y6_LOTGI
AAA domain-containing protein.
   
 0.961
V4BLJ2_LOTGI
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
 0.946
V3ZKD1_LOTGI
OMPdecase domain-containing protein.
   
 0.945
V3ZGE8_LOTGI
Uncharacterized protein.
  
 
 0.943
V3ZLC2_LOTGI
dUTPase domain-containing protein.
  
 0.939
V4AAV4_LOTGI
Nucleoside diphosphate kinase.
  
 
 0.936
V4AG85_LOTGI
Uridine kinase; Belongs to the uridine kinase family.
    
 0.936
V4AP57_LOTGI
Uridine kinase; Belongs to the uridine kinase family.
    
 0.936
V4ATN2_LOTGI
Nucleoside diphosphate kinase.
  
 
 0.933
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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